Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC9A3P48764 AL121672.3-201ENST00000608644 468 ntBASIC15.7■□□□□ 0.1
SLC9A3P48764 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SLC9A3P48764 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC9A3P48764 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SLC9A3P48764 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC9A3P48764 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC9A3P48764 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC9A3P48764 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC9A3P48764 AC092053.1-201ENST00000605787 1936 ntBASIC15.7■□□□□ 0.1
SLC9A3P48764 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC9A3P48764 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC9A3P48764 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SLC9A3P48764 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SLC9A3P48764 AC008741.2-201ENST00000612792 3115 ntBASIC15.7■□□□□ 0.1
SLC9A3P48764 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
SLC9A3P48764 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC9A3P48764 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SLC9A3P48764 LINC02199-201ENST00000506655 2702 ntBASIC15.69■□□□□ 0.1
SLC9A3P48764 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC9A3P48764 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC9A3P48764 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC9A3P48764 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC9A3P48764 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC9A3P48764 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SLC9A3P48764 CHCHD2P8-201ENST00000429873 447 ntBASIC15.69■□□□□ 0.1
SLC9A3P48764 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
SLC9A3P48764 BX276092.5-203ENST00000456199 560 ntBASIC15.69■□□□□ 0.1
SLC9A3P48764 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC9A3P48764 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC9A3P48764 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC9A3P48764 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
SLC9A3P48764 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SLC9A3P48764 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC9A3P48764 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC9A3P48764 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SLC9A3P48764 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SLC9A3P48764 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC9A3P48764 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC9A3P48764 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC9A3P48764 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC9A3P48764 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.68■□□□□ 0.1
SLC9A3P48764 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC9A3P48764 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC9A3P48764 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC9A3P48764 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SLC9A3P48764 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC9A3P48764 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC9A3P48764 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 AC003669.1-201ENST00000334569 611 ntBASIC15.68■□□□□ 0.1
SLC9A3P48764 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC9A3P48764 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC9A3P48764 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC9A3P48764 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.68■□□□□ 0.1
SLC9A3P48764 STK19B-204ENST00000512515 211 ntBASIC15.68■□□□□ 0.1
SLC9A3P48764 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC9A3P48764 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC9A3P48764 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC9A3P48764 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC9A3P48764 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms