Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.43■■□□□ 1.02
COL15A1P39059 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.43■■□□□ 1.02
COL15A1P39059 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
COL15A1P39059 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL15A1P39059 MIR346-201ENST00000362234 95 ntBASIC21.43■■□□□ 1.02
COL15A1P39059 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.43■■□□□ 1.02
COL15A1P39059 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL15A1P39059 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.43■■□□□ 1.02
COL15A1P39059 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.43■■□□□ 1.02
COL15A1P39059 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.43■■□□□ 1.02
COL15A1P39059 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL15A1P39059 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL15A1P39059 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
COL15A1P39059 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL15A1P39059 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
COL15A1P39059 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL15A1P39059 AC063926.2-201ENST00000623766 1308 ntBASIC21.42■■□□□ 1.02
COL15A1P39059 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL15A1P39059 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.42■■□□□ 1.02
COL15A1P39059 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL15A1P39059 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
COL15A1P39059 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.42■■□□□ 1.02
COL15A1P39059 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
COL15A1P39059 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.42■■□□□ 1.02
COL15A1P39059 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.42■■□□□ 1.02
COL15A1P39059 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL15A1P39059 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL15A1P39059 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL15A1P39059 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL15A1P39059 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.42■■□□□ 1.02
COL15A1P39059 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC21.42■■□□□ 1.02
COL15A1P39059 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL15A1P39059 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
COL15A1P39059 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.42■■□□□ 1.02
COL15A1P39059 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.42■■□□□ 1.02
COL15A1P39059 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.42■■□□□ 1.02
COL15A1P39059 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.42■■□□□ 1.02
COL15A1P39059 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.42■■□□□ 1.02
COL15A1P39059 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.42■■□□□ 1.02
COL15A1P39059 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.42■■□□□ 1.02
COL15A1P39059 LINC00896-202ENST00000609602 2128 ntBASIC21.42■■□□□ 1.02
COL15A1P39059 TOP3BP1-201ENST00000420768 1380 ntBASIC21.42■■□□□ 1.02
COL15A1P39059 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL15A1P39059 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.42■■□□□ 1.02
COL15A1P39059 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.41■■□□□ 1.02
COL15A1P39059 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.41■■□□□ 1.02
COL15A1P39059 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL15A1P39059 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.41■■□□□ 1.02
COL15A1P39059 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
COL15A1P39059 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
COL15A1P39059 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
COL15A1P39059 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL15A1P39059 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
COL15A1P39059 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL15A1P39059 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
COL15A1P39059 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.41■■□□□ 1.02
COL15A1P39059 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.41■■□□□ 1.02
COL15A1P39059 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
COL15A1P39059 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL15A1P39059 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL15A1P39059 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL15A1P39059 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
COL15A1P39059 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
COL15A1P39059 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL15A1P39059 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL15A1P39059 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
COL15A1P39059 AC093525.9-201ENST00000624961 1746 ntBASIC21.4■■□□□ 1.02
COL15A1P39059 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL15A1P39059 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.4■■□□□ 1.02
COL15A1P39059 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.4■■□□□ 1.02
COL15A1P39059 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.4■■□□□ 1.02
COL15A1P39059 CRB3P1-201ENST00000449338 276 ntBASIC21.4■■□□□ 1.02
COL15A1P39059 GAPDHP21-201ENST00000450301 1010 ntBASIC21.4■■□□□ 1.02
COL15A1P39059 AC004890.2-204ENST00000481968 304 ntBASIC21.4■■□□□ 1.02
COL15A1P39059 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.4■■□□□ 1.02
COL15A1P39059 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.4■■□□□ 1.02
COL15A1P39059 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
COL15A1P39059 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.4■■□□□ 1.02
COL15A1P39059 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL15A1P39059 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.4■■□□□ 1.02
COL15A1P39059 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.4■■□□□ 1.02
COL15A1P39059 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
COL15A1P39059 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL15A1P39059 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
COL15A1P39059 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.4■■□□□ 1.02
COL15A1P39059 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
COL15A1P39059 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL15A1P39059 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.4■■□□□ 1.02
COL15A1P39059 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL15A1P39059 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
COL15A1P39059 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL15A1P39059 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.4■■□□□ 1.02
COL15A1P39059 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
COL15A1P39059 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
COL15A1P39059 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
COL15A1P39059 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.39■■□□□ 1.02
COL15A1P39059 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
COL15A1P39059 MRPS18AP1-201ENST00000414458 589 ntBASIC21.39■■□□□ 1.02
COL15A1P39059 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.39■■□□□ 1.02
COL15A1P39059 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms