Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 ACTL9-202ENST00000612068 1252 ntBASIC17.69■□□□□ 0.42
SCNN1AP37088 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCNN1AP37088 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCNN1AP37088 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.69■□□□□ 0.42
SCNN1AP37088 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.69■□□□□ 0.42
SCNN1AP37088 AC131009.4-201ENST00000624048 1740 ntBASIC17.69■□□□□ 0.42
SCNN1AP37088 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SCNN1AP37088 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCNN1AP37088 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.69■□□□□ 0.42
SCNN1AP37088 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCNN1AP37088 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCNN1AP37088 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCNN1AP37088 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCNN1AP37088 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SCNN1AP37088 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.68■□□□□ 0.42
SCNN1AP37088 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SCNN1AP37088 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 SLC22A20-204ENST00000530038 1673 ntBASIC17.68■□□□□ 0.42
SCNN1AP37088 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SCNN1AP37088 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 CRYGEP-201ENST00000412192 528 ntBASIC17.68■□□□□ 0.42
SCNN1AP37088 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.68■□□□□ 0.42
SCNN1AP37088 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.68■□□□□ 0.42
SCNN1AP37088 CXCL1P1-201ENST00000502804 216 ntBASIC17.68■□□□□ 0.42
SCNN1AP37088 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SCNN1AP37088 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.68■□□□□ 0.42
SCNN1AP37088 AC034105.1-201ENST00000563488 319 ntBASIC17.68■□□□□ 0.42
SCNN1AP37088 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SCNN1AP37088 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.68■□□□□ 0.42
SCNN1AP37088 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.68■□□□□ 0.42
SCNN1AP37088 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCNN1AP37088 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.68■□□□□ 0.42
SCNN1AP37088 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SCNN1AP37088 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SCNN1AP37088 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCNN1AP37088 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SCNN1AP37088 OR6D1P-202ENST00000641007 5290 ntBASIC17.68■□□□□ 0.42
SCNN1AP37088 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.68■□□□□ 0.42
SCNN1AP37088 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.67■□□□□ 0.42
SCNN1AP37088 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SCNN1AP37088 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.67■□□□□ 0.42
SCNN1AP37088 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.67■□□□□ 0.42
SCNN1AP37088 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.67■□□□□ 0.42
SCNN1AP37088 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 IGLL3P-201ENST00000412472 434 ntBASIC17.67■□□□□ 0.42
SCNN1AP37088 AL590627.1-203ENST00000421194 1026 ntBASIC17.67■□□□□ 0.42
SCNN1AP37088 PMS2P1-201ENST00000431037 1228 ntBASIC17.67■□□□□ 0.42
SCNN1AP37088 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCNN1AP37088 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.67■□□□□ 0.42
SCNN1AP37088 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.67■□□□□ 0.42
SCNN1AP37088 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 AC087641.1-201ENST00000557561 1021 ntBASIC17.67■□□□□ 0.42
SCNN1AP37088 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.67■□□□□ 0.42
SCNN1AP37088 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.67■□□□□ 0.42
SCNN1AP37088 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.67■□□□□ 0.42
SCNN1AP37088 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SCNN1AP37088 AP001350.2-201ENST00000625104 1094 ntBASIC17.67■□□□□ 0.42
SCNN1AP37088 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SCNN1AP37088 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.67■□□□□ 0.42
SCNN1AP37088 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SCNN1AP37088 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SCNN1AP37088 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SCNN1AP37088 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.67■□□□□ 0.42
SCNN1AP37088 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.67■□□□□ 0.42
SCNN1AP37088 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCNN1AP37088 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SCNN1AP37088 AGGF1P2-201ENST00000426656 2106 ntBASIC17.66■□□□□ 0.42
SCNN1AP37088 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SCNN1AP37088 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCNN1AP37088 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.66■□□□□ 0.42
SCNN1AP37088 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.66■□□□□ 0.42
SCNN1AP37088 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms