Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
KRT9P35527 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
KRT9P35527 AL139384.1-201ENST00000612143 3047 ntBASIC18.7■□□□□ 0.58
KRT9P35527 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT9P35527 FRMD8P1-201ENST00000440433 1524 ntBASIC18.69■□□□□ 0.58
KRT9P35527 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KRT9P35527 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT9P35527 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
KRT9P35527 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.69■□□□□ 0.58
KRT9P35527 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 ATP5G2P1-201ENST00000433580 426 ntBASIC18.69■□□□□ 0.58
KRT9P35527 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KRT9P35527 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KRT9P35527 AC074051.2-201ENST00000565115 352 ntBASIC18.69■□□□□ 0.58
KRT9P35527 AC092329.2-201ENST00000598402 547 ntBASIC18.69■□□□□ 0.58
KRT9P35527 AC092119.3-201ENST00000612618 583 ntBASIC18.69■□□□□ 0.58
KRT9P35527 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT9P35527 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 TP73-AS1-210ENST00000637775 1455 ntBASIC18.69■□□□□ 0.58
KRT9P35527 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
KRT9P35527 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT9P35527 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KRT9P35527 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT9P35527 NSUN5P1-202ENST00000421140 1535 ntBASIC18.69■□□□□ 0.58
KRT9P35527 NSUN5P2-203ENST00000457352 1529 ntBASIC18.69■□□□□ 0.58
KRT9P35527 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
KRT9P35527 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT9P35527 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT9P35527 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT9P35527 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT9P35527 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 AC104819.1-201ENST00000504587 486 ntBASIC18.68■□□□□ 0.58
KRT9P35527 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.68■□□□□ 0.58
KRT9P35527 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT9P35527 AC011467.2-201ENST00000598425 242 ntBASIC18.68■□□□□ 0.58
KRT9P35527 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT9P35527 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT9P35527 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.68■□□□□ 0.58
KRT9P35527 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT9P35527 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KRT9P35527 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KRT9P35527 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT9P35527 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
KRT9P35527 PCDHB17P-201ENST00000539533 2393 ntBASIC18.67■□□□□ 0.58
KRT9P35527 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT9P35527 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 AL353593.2-201ENST00000602529 1483 ntBASIC18.67■□□□□ 0.58
KRT9P35527 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
KRT9P35527 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT9P35527 IGHV3-47-201ENST00000425060 335 ntBASIC18.67■□□□□ 0.58
KRT9P35527 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
KRT9P35527 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT9P35527 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT9P35527 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT9P35527 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT9P35527 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT9P35527 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
KRT9P35527 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms