Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RORAP35398 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.2■□□□□ 0.18
RORAP35398 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RORAP35398 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.2■□□□□ 0.18
RORAP35398 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RORAP35398 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
RORAP35398 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
RORAP35398 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RORAP35398 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RORAP35398 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RORAP35398 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RORAP35398 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
RORAP35398 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
RORAP35398 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.19■□□□□ 0.18
RORAP35398 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.19■□□□□ 0.18
RORAP35398 AC074386.1-202ENST00000463561 864 ntBASIC16.19■□□□□ 0.18
RORAP35398 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RORAP35398 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.19■□□□□ 0.18
RORAP35398 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RORAP35398 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.19■□□□□ 0.18
RORAP35398 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RORAP35398 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RORAP35398 ELL2P1-201ENST00000413990 1906 ntBASIC16.19■□□□□ 0.18
RORAP35398 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RORAP35398 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RORAP35398 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
RORAP35398 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RORAP35398 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RORAP35398 AC016396.2-201ENST00000562575 1417 ntBASIC16.19■□□□□ 0.18
RORAP35398 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.19■□□□□ 0.18
RORAP35398 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.19■□□□□ 0.18
RORAP35398 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.18■□□□□ 0.18
RORAP35398 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.18■□□□□ 0.18
RORAP35398 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RORAP35398 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RORAP35398 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
RORAP35398 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.18■□□□□ 0.18
RORAP35398 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.18■□□□□ 0.18
RORAP35398 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RORAP35398 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.18■□□□□ 0.18
RORAP35398 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.18■□□□□ 0.18
RORAP35398 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.18■□□□□ 0.18
RORAP35398 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.18■□□□□ 0.18
RORAP35398 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
RORAP35398 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RORAP35398 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
RORAP35398 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RORAP35398 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RORAP35398 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RORAP35398 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.18■□□□□ 0.18
RORAP35398 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RORAP35398 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RORAP35398 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RORAP35398 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RORAP35398 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.17■□□□□ 0.18
RORAP35398 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.17■□□□□ 0.18
RORAP35398 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.17■□□□□ 0.18
RORAP35398 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RORAP35398 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.17■□□□□ 0.18
RORAP35398 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.17■□□□□ 0.18
RORAP35398 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RORAP35398 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.17■□□□□ 0.18
RORAP35398 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.17■□□□□ 0.18
RORAP35398 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.17■□□□□ 0.18
RORAP35398 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.17■□□□□ 0.18
RORAP35398 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.17■□□□□ 0.18
RORAP35398 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.17■□□□□ 0.18
RORAP35398 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
RORAP35398 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.17■□□□□ 0.18
RORAP35398 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.17■□□□□ 0.18
RORAP35398 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.17■□□□□ 0.18
RORAP35398 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RORAP35398 OR6D1P-203ENST00000641209 4860 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms