Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.72■□□□□ 0.75
POLR2AP24928 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.72■□□□□ 0.75
POLR2AP24928 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
POLR2AP24928 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2AP24928 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2AP24928 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR2AP24928 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR2AP24928 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2AP24928 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2AP24928 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR2AP24928 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR2AP24928 AL021920.2-201ENST00000624828 1351 ntBASIC19.72■□□□□ 0.75
POLR2AP24928 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2AP24928 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2AP24928 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2AP24928 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
POLR2AP24928 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.72■□□□□ 0.75
POLR2AP24928 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2AP24928 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.72■□□□□ 0.75
POLR2AP24928 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.72■□□□□ 0.75
POLR2AP24928 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR2AP24928 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR2AP24928 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2AP24928 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2AP24928 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2AP24928 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2AP24928 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.71■□□□□ 0.75
POLR2AP24928 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
POLR2AP24928 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2AP24928 AC012317.2-201ENST00000623305 2251 ntBASIC19.71■□□□□ 0.75
POLR2AP24928 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.71■□□□□ 0.75
POLR2AP24928 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
POLR2AP24928 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.71■□□□□ 0.75
POLR2AP24928 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.71■□□□□ 0.75
POLR2AP24928 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.71■□□□□ 0.75
POLR2AP24928 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2AP24928 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2AP24928 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.71■□□□□ 0.75
POLR2AP24928 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2AP24928 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.71■□□□□ 0.75
POLR2AP24928 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.71■□□□□ 0.75
POLR2AP24928 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.71■□□□□ 0.75
POLR2AP24928 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.71■□□□□ 0.75
POLR2AP24928 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.71■□□□□ 0.75
POLR2AP24928 TPRX2P-201ENST00000535362 881 ntBASIC19.71■□□□□ 0.75
POLR2AP24928 AC092552.1-201ENST00000547243 906 ntBASIC19.71■□□□□ 0.75
POLR2AP24928 AP005482.1-201ENST00000563722 1273 ntBASIC19.71■□□□□ 0.75
POLR2AP24928 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
POLR2AP24928 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2AP24928 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
POLR2AP24928 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2AP24928 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2AP24928 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2AP24928 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.71■□□□□ 0.75
POLR2AP24928 KRT8P12-202ENST00000472924 1397 ntBASIC19.71■□□□□ 0.75
POLR2AP24928 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
POLR2AP24928 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.7■□□□□ 0.74
POLR2AP24928 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR2AP24928 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR2AP24928 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.7■□□□□ 0.74
POLR2AP24928 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.7■□□□□ 0.74
POLR2AP24928 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.7■□□□□ 0.74
POLR2AP24928 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2AP24928 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2AP24928 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2AP24928 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2AP24928 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
POLR2AP24928 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2AP24928 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2AP24928 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR2AP24928 AC007541.1-201ENST00000570282 1469 ntBASIC19.7■□□□□ 0.74
POLR2AP24928 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.7■□□□□ 0.74
POLR2AP24928 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2AP24928 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR2AP24928 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.7■□□□□ 0.74
POLR2AP24928 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR2AP24928 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.7■□□□□ 0.74
POLR2AP24928 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.7■□□□□ 0.74
POLR2AP24928 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.7■□□□□ 0.74
POLR2AP24928 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2AP24928 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR2AP24928 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2AP24928 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
POLR2AP24928 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2AP24928 AL035456.1-201ENST00000456064 1369 ntBASIC19.69■□□□□ 0.74
POLR2AP24928 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.69■□□□□ 0.74
POLR2AP24928 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.69■□□□□ 0.74
POLR2AP24928 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
POLR2AP24928 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.69■□□□□ 0.74
POLR2AP24928 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2AP24928 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.69■□□□□ 0.74
POLR2AP24928 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2AP24928 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2AP24928 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.69■□□□□ 0.74
POLR2AP24928 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
POLR2AP24928 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.69■□□□□ 0.74
POLR2AP24928 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2AP24928 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2AP24928 AC092658.1-201ENST00000505836 891 ntBASIC19.69■□□□□ 0.74
POLR2AP24928 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms