Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 HBZP1-201ENST00000354915 429 ntBASIC15.92■□□□□ 0.14
NR4A1P22736 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 AC092597.1-201ENST00000487352 616 ntBASIC15.92■□□□□ 0.14
NR4A1P22736 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.92■□□□□ 0.14
NR4A1P22736 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.92■□□□□ 0.14
NR4A1P22736 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NR4A1P22736 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
NR4A1P22736 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
NR4A1P22736 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.92■□□□□ 0.14
NR4A1P22736 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
NR4A1P22736 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NR4A1P22736 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
NR4A1P22736 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NR4A1P22736 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.91■□□□□ 0.14
NR4A1P22736 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.91■□□□□ 0.14
NR4A1P22736 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NR4A1P22736 AC078925.2-201ENST00000624013 1973 ntBASIC15.91■□□□□ 0.14
NR4A1P22736 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.91■□□□□ 0.14
NR4A1P22736 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NR4A1P22736 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.91■□□□□ 0.14
NR4A1P22736 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
NR4A1P22736 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.91■□□□□ 0.14
NR4A1P22736 ZNF444P1-201ENST00000559497 298 ntBASIC15.91■□□□□ 0.14
NR4A1P22736 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.91■□□□□ 0.14
NR4A1P22736 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NR4A1P22736 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.91■□□□□ 0.14
NR4A1P22736 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.91■□□□□ 0.14
NR4A1P22736 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NR4A1P22736 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.91■□□□□ 0.14
NR4A1P22736 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NR4A1P22736 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.9■□□□□ 0.14
NR4A1P22736 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
NR4A1P22736 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.9■□□□□ 0.14
NR4A1P22736 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.9■□□□□ 0.14
NR4A1P22736 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
NR4A1P22736 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.9■□□□□ 0.14
NR4A1P22736 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NR4A1P22736 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.9■□□□□ 0.14
NR4A1P22736 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.9■□□□□ 0.14
NR4A1P22736 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms