Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SYN1P17600 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SYN1P17600 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.36■□□□□ 0.53
SYN1P17600 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.36■□□□□ 0.53
SYN1P17600 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SYN1P17600 AC092933.1-201ENST00000393644 945 ntBASIC18.36■□□□□ 0.53
SYN1P17600 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SYN1P17600 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SYN1P17600 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.36■□□□□ 0.53
SYN1P17600 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SYN1P17600 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SYN1P17600 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SYN1P17600 AC093004.1-201ENST00000508850 424 ntBASIC18.36■□□□□ 0.53
SYN1P17600 SPDYE18-201ENST00000510091 1050 ntBASIC18.36■□□□□ 0.53
SYN1P17600 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.36■□□□□ 0.53
SYN1P17600 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.36■□□□□ 0.53
SYN1P17600 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SYN1P17600 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SYN1P17600 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.35■□□□□ 0.53
SYN1P17600 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.35■□□□□ 0.53
SYN1P17600 REXO1L9P-201ENST00000604264 2108 ntBASIC18.35■□□□□ 0.53
SYN1P17600 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.35■□□□□ 0.53
SYN1P17600 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.35■□□□□ 0.53
SYN1P17600 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.35■□□□□ 0.53
SYN1P17600 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SYN1P17600 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.35■□□□□ 0.53
SYN1P17600 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.35■□□□□ 0.53
SYN1P17600 ACTBP11-201ENST00000436287 1126 ntBASIC18.35■□□□□ 0.53
SYN1P17600 CROCCP4-201ENST00000457096 498 ntBASIC18.35■□□□□ 0.53
SYN1P17600 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.35■□□□□ 0.53
SYN1P17600 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.35■□□□□ 0.53
SYN1P17600 AL139327.4-201ENST00000612362 153 ntBASIC18.35■□□□□ 0.53
SYN1P17600 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SYN1P17600 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
SYN1P17600 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SYN1P17600 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SYN1P17600 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SYN1P17600 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.35■□□□□ 0.53
SYN1P17600 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SYN1P17600 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.34■□□□□ 0.53
SYN1P17600 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.34■□□□□ 0.53
SYN1P17600 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SYN1P17600 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.34■□□□□ 0.53
SYN1P17600 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.34■□□□□ 0.53
SYN1P17600 REXO1L11P-201ENST00000620964 1927 ntBASIC18.34■□□□□ 0.53
SYN1P17600 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SYN1P17600 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.34■□□□□ 0.53
SYN1P17600 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.34■□□□□ 0.53
SYN1P17600 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.34■□□□□ 0.53
SYN1P17600 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.34■□□□□ 0.53
SYN1P17600 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SYN1P17600 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.34■□□□□ 0.53
SYN1P17600 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.34■□□□□ 0.53
SYN1P17600 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.34■□□□□ 0.53
SYN1P17600 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SYN1P17600 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SYN1P17600 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms