Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 NTF6B-201ENST00000591913 560 ntBASIC16.56■□□□□ 0.24
LINGO3P0C6S8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 SPDYE13P-201ENST00000445314 798 ntBASIC16.55■□□□□ 0.24
LINGO3P0C6S8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 AC024563.2-201ENST00000603282 481 ntBASIC16.55■□□□□ 0.24
LINGO3P0C6S8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LINGO3P0C6S8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 AC138035.3-201ENST00000622706 2791 ntBASIC16.54■□□□□ 0.24
LINGO3P0C6S8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 MIR662-201ENST00000384847 95 ntBASIC16.54■□□□□ 0.24
LINGO3P0C6S8 AL031133.1-201ENST00000406807 723 ntBASIC16.54■□□□□ 0.24
LINGO3P0C6S8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 KRT89P-201ENST00000620027 1478 ntBASIC16.54■□□□□ 0.24
LINGO3P0C6S8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINGO3P0C6S8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINGO3P0C6S8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINGO3P0C6S8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINGO3P0C6S8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms