Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
MT-ND1P03886 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MT-ND1P03886 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MT-ND1P03886 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
MT-ND1P03886 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 ALOX12P2-203ENST00000570921 1945 ntBASIC16.14■□□□□ 0.17
MT-ND1P03886 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
MT-ND1P03886 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 MIR662-201ENST00000384847 95 ntBASIC16.14■□□□□ 0.17
MT-ND1P03886 IGHGP-201ENST00000390555 1178 ntBASIC16.14■□□□□ 0.17
MT-ND1P03886 AC005521.1-201ENST00000393351 872 ntBASIC16.14■□□□□ 0.17
MT-ND1P03886 MTCL1P1-201ENST00000446207 792 ntBASIC16.14■□□□□ 0.17
MT-ND1P03886 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.14■□□□□ 0.17
MT-ND1P03886 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.14■□□□□ 0.17
MT-ND1P03886 HOMER2P1-201ENST00000455653 964 ntBASIC16.14■□□□□ 0.17
MT-ND1P03886 AP003733.1-201ENST00000491725 852 ntBASIC16.14■□□□□ 0.17
MT-ND1P03886 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 ZNF444P1-201ENST00000559497 298 ntBASIC16.14■□□□□ 0.17
MT-ND1P03886 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.14■□□□□ 0.17
MT-ND1P03886 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.14■□□□□ 0.17
MT-ND1P03886 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
MT-ND1P03886 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND1P03886 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND1P03886 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.14■□□□□ 0.17
MT-ND1P03886 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND1P03886 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.14■□□□□ 0.17
MT-ND1P03886 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND1P03886 AC024909.3-201ENST00000611513 2257 ntBASIC16.14■□□□□ 0.17
MT-ND1P03886 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
MT-ND1P03886 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.13■□□□□ 0.17
MT-ND1P03886 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
MT-ND1P03886 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.13■□□□□ 0.17
MT-ND1P03886 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.13■□□□□ 0.17
MT-ND1P03886 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.13■□□□□ 0.17
MT-ND1P03886 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.13■□□□□ 0.17
MT-ND1P03886 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
MT-ND1P03886 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.13■□□□□ 0.17
MT-ND1P03886 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.13■□□□□ 0.17
MT-ND1P03886 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.13■□□□□ 0.17
MT-ND1P03886 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
MT-ND1P03886 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
MT-ND1P03886 RNF152P1-201ENST00000397754 604 ntBASIC16.13■□□□□ 0.17
MT-ND1P03886 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.13■□□□□ 0.17
MT-ND1P03886 TSPY5P-201ENST00000426936 936 ntBASIC16.13■□□□□ 0.17
MT-ND1P03886 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.13■□□□□ 0.17
MT-ND1P03886 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
MT-ND1P03886 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.13■□□□□ 0.17
MT-ND1P03886 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.13■□□□□ 0.17
MT-ND1P03886 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.13■□□□□ 0.17
MT-ND1P03886 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.13■□□□□ 0.17
MT-ND1P03886 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.13■□□□□ 0.17
MT-ND1P03886 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.13■□□□□ 0.17
MT-ND1P03886 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MT-ND1P03886 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.13■□□□□ 0.17
MT-ND1P03886 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.13■□□□□ 0.17
MT-ND1P03886 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND1P03886 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.13■□□□□ 0.17
MT-ND1P03886 AL353692.3-201ENST00000407031 1396 ntBASIC16.13■□□□□ 0.17
MT-ND1P03886 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MT-ND1P03886 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND1P03886 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
MT-ND1P03886 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms