Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFPL1O75677 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RFPL1O75677 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RFPL1O75677 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFPL1O75677 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.14■□□□□ 0.33
RFPL1O75677 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RFPL1O75677 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 HLA-A-202ENST00000376806 1854 ntBASIC17.14■□□□□ 0.33
RFPL1O75677 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFPL1O75677 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
RFPL1O75677 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.13■□□□□ 0.33
RFPL1O75677 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 AC132938.5-201ENST00000624980 1813 ntBASIC17.13■□□□□ 0.33
RFPL1O75677 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.13■□□□□ 0.33
RFPL1O75677 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.13■□□□□ 0.33
RFPL1O75677 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RFPL1O75677 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RFPL1O75677 SLC25A6P4-201ENST00000586535 553 ntBASIC17.13■□□□□ 0.33
RFPL1O75677 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.13■□□□□ 0.33
RFPL1O75677 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.13■□□□□ 0.33
RFPL1O75677 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.13■□□□□ 0.33
RFPL1O75677 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RFPL1O75677 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 AC008741.2-201ENST00000612792 3115 ntBASIC17.13■□□□□ 0.33
RFPL1O75677 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
RFPL1O75677 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.13■□□□□ 0.33
RFPL1O75677 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFPL1O75677 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.13■□□□□ 0.33
RFPL1O75677 AL162727.3-201ENST00000635661 2787 ntBASIC17.12■□□□□ 0.33
RFPL1O75677 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RFPL1O75677 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.12■□□□□ 0.33
RFPL1O75677 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.12■□□□□ 0.33
RFPL1O75677 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.12■□□□□ 0.33
RFPL1O75677 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
RFPL1O75677 STK19B-204ENST00000512515 211 ntBASIC17.12■□□□□ 0.33
RFPL1O75677 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.12■□□□□ 0.33
RFPL1O75677 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.12■□□□□ 0.33
RFPL1O75677 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RFPL1O75677 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.12■□□□□ 0.33
RFPL1O75677 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.12■□□□□ 0.33
RFPL1O75677 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.12■□□□□ 0.33
RFPL1O75677 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RFPL1O75677 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.12■□□□□ 0.33
RFPL1O75677 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.12■□□□□ 0.33
RFPL1O75677 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RFPL1O75677 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
RFPL1O75677 AC008894.3-201ENST00000624324 3103 ntBASIC17.12■□□□□ 0.33
RFPL1O75677 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFPL1O75677 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
RFPL1O75677 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.11■□□□□ 0.33
RFPL1O75677 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.11■□□□□ 0.33
RFPL1O75677 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms