Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
ZNF253O75346 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.36□□□□□ -0.27
ZNF253O75346 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 AC022188.1-201ENST00000620960 1664 ntBASIC13.36□□□□□ -0.27
ZNF253O75346 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ZNF253O75346 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ZNF253O75346 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
ZNF253O75346 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
ZNF253O75346 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 AC007950.2-201ENST00000615045 2347 ntBASIC13.35□□□□□ -0.27
ZNF253O75346 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.35□□□□□ -0.27
ZNF253O75346 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
ZNF253O75346 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.35□□□□□ -0.27
ZNF253O75346 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ZNF253O75346 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ZNF253O75346 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF253O75346 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.35□□□□□ -0.27
ZNF253O75346 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF253O75346 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF253O75346 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ZNF253O75346 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.35□□□□□ -0.27
ZNF253O75346 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.35□□□□□ -0.27
ZNF253O75346 AC140113.3-201ENST00000605663 199 ntBASIC13.35□□□□□ -0.27
ZNF253O75346 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.35□□□□□ -0.27
ZNF253O75346 AC079602.3-201ENST00000623931 403 ntBASIC13.35□□□□□ -0.27
ZNF253O75346 TMEM191A-211ENST00000637163 1067 ntBASIC13.35□□□□□ -0.27
ZNF253O75346 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.35□□□□□ -0.27
ZNF253O75346 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ZNF253O75346 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ZNF253O75346 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
ZNF253O75346 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.35□□□□□ -0.27
ZNF253O75346 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.35□□□□□ -0.27
ZNF253O75346 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 AC097374.2-201ENST00000618617 1306 ntBASIC13.35□□□□□ -0.27
ZNF253O75346 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ZNF253O75346 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZNF253O75346 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ZNF253O75346 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
ZNF253O75346 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.34□□□□□ -0.27
ZNF253O75346 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.34□□□□□ -0.27
ZNF253O75346 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 IGHGP-201ENST00000390555 1178 ntBASIC13.34□□□□□ -0.27
ZNF253O75346 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 STARP1-201ENST00000397973 869 ntBASIC13.34□□□□□ -0.27
ZNF253O75346 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.34□□□□□ -0.27
ZNF253O75346 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZNF253O75346 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms