Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 MED15P5-201ENST00000423150 992 ntBASIC17.25■□□□□ 0.35
PRAMEF11O60813 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.25■□□□□ 0.35
PRAMEF11O60813 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 AC096734.2-201ENST00000562054 433 ntBASIC17.25■□□□□ 0.35
PRAMEF11O60813 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 AC005412.3-201ENST00000580309 715 ntBASIC17.25■□□□□ 0.35
PRAMEF11O60813 FAM197Y3-203ENST00000618346 717 ntBASIC17.25■□□□□ 0.35
PRAMEF11O60813 AC010507.1-201ENST00000633895 436 ntBASIC17.25■□□□□ 0.35
PRAMEF11O60813 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF11O60813 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF11O60813 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 RHOQP3-201ENST00000437982 621 ntBASIC17.24■□□□□ 0.35
PRAMEF11O60813 KRT18P2-201ENST00000447938 1258 ntBASIC17.24■□□□□ 0.35
PRAMEF11O60813 KRT18P58-201ENST00000527480 1120 ntBASIC17.24■□□□□ 0.35
PRAMEF11O60813 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 MPDU1-223ENST00000582151 728 ntBASIC17.24■□□□□ 0.35
PRAMEF11O60813 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 AL671883.3-201ENST00000603274 991 ntBASIC17.24■□□□□ 0.35
PRAMEF11O60813 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 AC020916.1-201ENST00000587762 1774 ntBASIC17.24■□□□□ 0.35
PRAMEF11O60813 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEF11O60813 AL353732.1-201ENST00000569618 1459 ntBASIC17.24■□□□□ 0.35
PRAMEF11O60813 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF11O60813 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms