Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAF3IP2O43734 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAF3IP2O43734 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAF3IP2O43734 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAF3IP2O43734 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.02
TRAF3IP2O43734 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.21■□□□□ 0.02
TRAF3IP2O43734 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAF3IP2O43734 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAF3IP2O43734 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAF3IP2O43734 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TRAF3IP2O43734 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 AC106886.4-201ENST00000623557 2502 ntBASIC15.2■□□□□ 0.02
TRAF3IP2O43734 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 PTCHD3P3-201ENST00000403073 906 ntBASIC15.2■□□□□ 0.02
TRAF3IP2O43734 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 PAWRP1-201ENST00000451083 565 ntBASIC15.2■□□□□ 0.02
TRAF3IP2O43734 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAF3IP2O43734 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 AL160237.2-201ENST00000556165 472 ntBASIC15.19■□□□□ 0.02
TRAF3IP2O43734 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAF3IP2O43734 TUBB8P12-201ENST00000308911 1335 ntBASIC15.18■□□□□ 0.02
TRAF3IP2O43734 TUBB7P-202ENST00000428444 1305 ntBASIC15.18■□□□□ 0.02
TRAF3IP2O43734 TUBB8P7-204ENST00000567960 1332 ntBASIC15.18■□□□□ 0.02
TRAF3IP2O43734 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms