Protein–RNA interactions for Protein: O43246

SLC7A4, Cationic amino acid transporter 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC7A4O43246 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC7A4O43246 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.37
SLC7A4O43246 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC7A4O43246 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC7A4O43246 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC7A4O43246 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC7A4O43246 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC7A4O43246 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC7A4O43246 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC7A4O43246 MCCD1P2-201ENST00000423228 335 ntBASIC17.33■□□□□ 0.36
SLC7A4O43246 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC7A4O43246 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC7A4O43246 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC7A4O43246 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC7A4O43246 KRT18P2-201ENST00000447938 1258 ntBASIC17.33■□□□□ 0.36
SLC7A4O43246 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC7A4O43246 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC7A4O43246 AC010327.4-202ENST00000591484 748 ntBASIC17.33■□□□□ 0.36
SLC7A4O43246 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC7A4O43246 AC009053.2-201ENST00000563701 2365 ntBASIC17.33■□□□□ 0.36
SLC7A4O43246 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC7A4O43246 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC7A4O43246 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC7A4O43246 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SLC7A4O43246 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SLC7A4O43246 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SLC7A4O43246 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC7A4O43246 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC7A4O43246 AC060834.1-201ENST00000443027 2032 ntBASIC17.32■□□□□ 0.36
SLC7A4O43246 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC7A4O43246 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC7A4O43246 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
SLC7A4O43246 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC7A4O43246 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC7A4O43246 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.32■□□□□ 0.36
SLC7A4O43246 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC7A4O43246 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.32■□□□□ 0.36
SLC7A4O43246 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC7A4O43246 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC7A4O43246 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SLC7A4O43246 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SLC7A4O43246 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC7A4O43246 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC7A4O43246 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC7A4O43246 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SLC7A4O43246 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC7A4O43246 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC7A4O43246 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC7A4O43246 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC7A4O43246 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC7A4O43246 AL590787.1-201ENST00000568856 1315 ntBASIC17.31■□□□□ 0.36
SLC7A4O43246 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC7A4O43246 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLC7A4O43246 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC7A4O43246 AC023274.1-201ENST00000418278 595 ntBASIC17.31■□□□□ 0.36
SLC7A4O43246 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC7A4O43246 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC7A4O43246 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC7A4O43246 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC7A4O43246 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC7A4O43246 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC7A4O43246 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC7A4O43246 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 EGFEM1P-202ENST00000431685 1563 ntBASIC17.31■□□□□ 0.36
SLC7A4O43246 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC7A4O43246 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms