Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.63■□□□□ 0.25
HDAC3O15379 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 AC113347.1-201ENST00000413321 391 ntBASIC16.63■□□□□ 0.25
HDAC3O15379 AL137013.1-201ENST00000432946 1228 ntBASIC16.63■□□□□ 0.25
HDAC3O15379 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.63■□□□□ 0.25
HDAC3O15379 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.63■□□□□ 0.25
HDAC3O15379 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.63■□□□□ 0.25
HDAC3O15379 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.63■□□□□ 0.25
HDAC3O15379 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.63■□□□□ 0.25
HDAC3O15379 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.63■□□□□ 0.25
HDAC3O15379 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HDAC3O15379 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.63■□□□□ 0.25
HDAC3O15379 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.63■□□□□ 0.25
HDAC3O15379 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 AC132938.5-201ENST00000624980 1813 ntBASIC16.63■□□□□ 0.25
HDAC3O15379 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.63■□□□□ 0.25
HDAC3O15379 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.63■□□□□ 0.25
HDAC3O15379 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
HDAC3O15379 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HDAC3O15379 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HDAC3O15379 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.62■□□□□ 0.25
HDAC3O15379 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.62■□□□□ 0.25
HDAC3O15379 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.62■□□□□ 0.25
HDAC3O15379 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HDAC3O15379 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 TERF1P1-201ENST00000311003 1181 ntBASIC16.62■□□□□ 0.25
HDAC3O15379 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 RNF152P1-201ENST00000397754 604 ntBASIC16.62■□□□□ 0.25
HDAC3O15379 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.62■□□□□ 0.25
HDAC3O15379 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.62■□□□□ 0.25
HDAC3O15379 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.62■□□□□ 0.25
HDAC3O15379 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.62■□□□□ 0.25
HDAC3O15379 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.62■□□□□ 0.25
HDAC3O15379 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.62■□□□□ 0.25
HDAC3O15379 AL592071.1-201ENST00000611956 408 ntBASIC16.62■□□□□ 0.25
HDAC3O15379 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.62■□□□□ 0.25
HDAC3O15379 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HDAC3O15379 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDAC3O15379 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.62■□□□□ 0.25
HDAC3O15379 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.61■□□□□ 0.25
HDAC3O15379 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.61■□□□□ 0.25
HDAC3O15379 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
HDAC3O15379 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
HDAC3O15379 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.61■□□□□ 0.25
HDAC3O15379 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 MTHFR-217ENST00000641820 1569 ntBASIC16.61■□□□□ 0.25
HDAC3O15379 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.61■□□□□ 0.25
HDAC3O15379 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.61■□□□□ 0.25
HDAC3O15379 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDAC3O15379 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.61■□□□□ 0.25
HDAC3O15379 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
HDAC3O15379 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.61■□□□□ 0.25
HDAC3O15379 AL845331.1-201ENST00000424978 1190 ntBASIC16.61■□□□□ 0.25
HDAC3O15379 SPDYE13P-201ENST00000445314 798 ntBASIC16.61■□□□□ 0.25
HDAC3O15379 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.61■□□□□ 0.25
HDAC3O15379 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms