Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC188H7C350 HYMAI.1-201ENST00000620949 238 ntBASIC17.76■□□□□ 0.43
CCDC188H7C350 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC188H7C350 TMEM191A-211ENST00000637163 1067 ntBASIC17.76■□□□□ 0.43
CCDC188H7C350 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC188H7C350 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC188H7C350 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC188H7C350 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC188H7C350 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC188H7C350 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC188H7C350 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 LINC00895-201ENST00000629028 1637 ntBASIC17.76■□□□□ 0.43
CCDC188H7C350 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC188H7C350 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC188H7C350 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 AC132938.5-201ENST00000624980 1813 ntBASIC17.75■□□□□ 0.43
CCDC188H7C350 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC188H7C350 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC188H7C350 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC188H7C350 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC188H7C350 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC188H7C350 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC188H7C350 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC188H7C350 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC188H7C350 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
CCDC188H7C350 KLF4P1-201ENST00000412782 1185 ntBASIC17.75■□□□□ 0.43
CCDC188H7C350 AC117947.1-201ENST00000427448 529 ntBASIC17.75■□□□□ 0.43
CCDC188H7C350 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC188H7C350 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC188H7C350 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC188H7C350 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC188H7C350 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC188H7C350 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC188H7C350 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC188H7C350 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC188H7C350 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCDC188H7C350 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC188H7C350 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC188H7C350 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC188H7C350 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCDC188H7C350 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC188H7C350 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC188H7C350 AC087499.1-201ENST00000418141 1075 ntBASIC17.74■□□□□ 0.43
CCDC188H7C350 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC188H7C350 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC188H7C350 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC188H7C350 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC188H7C350 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC188H7C350 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC188H7C350 AL592071.1-201ENST00000611956 408 ntBASIC17.74■□□□□ 0.43
CCDC188H7C350 AD001527.2-201ENST00000622994 785 ntBASIC17.74■□□□□ 0.43
CCDC188H7C350 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCDC188H7C350 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC188H7C350 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC188H7C350 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms