Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC016396.2-201ENST00000562575 1417 ntBASIC18.56■□□□□ 0.56
CCDC66A2RUB6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC66A2RUB6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 STARP1-201ENST00000397973 869 ntBASIC18.55■□□□□ 0.56
CCDC66A2RUB6 FAM8A6P-201ENST00000407496 1135 ntBASIC18.55■□□□□ 0.56
CCDC66A2RUB6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 NORAD-201ENST00000565493 5339 ntBASIC18.55■□□□□ 0.56
CCDC66A2RUB6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC66A2RUB6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 SPDYE15P-201ENST00000424157 909 ntBASIC18.54■□□□□ 0.56
CCDC66A2RUB6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.54■□□□□ 0.56
CCDC66A2RUB6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 ATP5G1P1-201ENST00000448724 379 ntBASIC18.54■□□□□ 0.56
CCDC66A2RUB6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 AC010203.1-204ENST00000548782 407 ntBASIC18.54■□□□□ 0.56
CCDC66A2RUB6 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.54■□□□□ 0.56
CCDC66A2RUB6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 AC126755.1-201ENST00000525846 6405 ntBASIC18.54■□□□□ 0.56
CCDC66A2RUB6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC66A2RUB6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 AL365209.1-201ENST00000624418 6473 ntBASIC18.53■□□□□ 0.56
CCDC66A2RUB6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms