Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AD000864.1-201ENST00000624076 2295 ntBASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 AP002414.3-201ENST00000589352 1468 ntBASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC196A0A1B0GTZ2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC022211.2-201ENST00000585075 2527 ntBASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC009078.2-202ENST00000463353 338 ntBASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 RNA5SP419-201ENST00000515908 135 ntBASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC196A0A1B0GTZ2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CCDC196A0A1B0GTZ2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 AC105020.1-201ENST00000435356 2205 ntBASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 AC087163.2-201ENST00000457299 853 ntBASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 MIR7706-201ENST00000613747 67 ntBASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 KRT8P49-201ENST00000604166 1432 ntBASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC196A0A1B0GTZ2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 AC092910.1-201ENST00000482027 1129 ntBASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms