Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC246785.2-201ENST00000432512 513 ntBASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC022616.7-201ENST00000525383 220 ntBASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 LINC01238-205ENST00000567549 1107 ntBASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC011498.5-201ENST00000592027 486 ntBASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV6-7A0A0A0MS04 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC211429.1-201ENST00000415277 523 ntBASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 STK19B-204ENST00000512515 211 ntBASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 LINC01023-201ENST00000606054 436 ntBASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV6-7A0A0A0MS04 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 HYMAI-201ENST00000635591 3347 ntBASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV6-7A0A0A0MS04 AC126177.1-201ENST00000547829 2218 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms