Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 CCS-201ENST00000310190 942 ntTSL 5 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 IGHV3-47-201ENST00000425060 335 ntBASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 AP000867.3-201ENST00000524675 377 ntBASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 NPAP1P7-201ENST00000613027 823 ntBASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RHBDD3Q9Y3P4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 AC096582.2-201ENST00000510860 516 ntBASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 AC074051.2-201ENST00000565115 352 ntBASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 BNIP3P18-201ENST00000593976 575 ntBASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 AC092119.3-201ENST00000612618 583 ntBASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RHBDD3Q9Y3P4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms