Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 ID1-201ENST00000376105 1233 ntBASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 FITM1-202ENST00000559294 800 ntBASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 AC092171.3-201ENST00000610122 2651 ntBASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KCNIP3Q9Y2W7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
KCNIP3Q9Y2W7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KCNIP3Q9Y2W7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KCNIP3Q9Y2W7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
KCNIP3Q9Y2W7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.33□□□□□ -0.11
KCNIP3Q9Y2W7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.33□□□□□ -0.11
KCNIP3Q9Y2W7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
KCNIP3Q9Y2W7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
KCNIP3Q9Y2W7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.33□□□□□ -0.11
KCNIP3Q9Y2W7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.33□□□□□ -0.11
KCNIP3Q9Y2W7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
KCNIP3Q9Y2W7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 TSPY14P-201ENST00000303979 915 ntBASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 UBE2SP1-201ENST00000450587 669 ntBASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 RBM17P1-201ENST00000453646 1190 ntBASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 IGHV3-52-201ENST00000519770 353 ntBASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 AP002490.2-201ENST00000524791 560 ntBASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.33□□□□□ -0.12
KCNIP3Q9Y2W7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms