Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MRPS28Q9Y2Q9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MRPS28Q9Y2Q9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.75□□□□□ -0.05
MRPS28Q9Y2Q9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
MRPS28Q9Y2Q9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MRPS28Q9Y2Q9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 AC090616.6-201ENST00000582640 721 ntBASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.74□□□□□ -0.05
MRPS28Q9Y2Q9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 AC006449.5-201ENST00000610658 2098 ntBASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 AC003669.1-201ENST00000334569 611 ntBASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 KLF4P1-201ENST00000412782 1185 ntBASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 AL845331.1-201ENST00000424978 1190 ntBASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 AL671277.2-201ENST00000458060 996 ntBASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 AP002490.2-201ENST00000524791 560 ntBASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.73□□□□□ -0.05
MRPS28Q9Y2Q9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MRPS28Q9Y2Q9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms