Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCKAP1Q9Y2A7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCKAP1Q9Y2A7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCKAP1Q9Y2A7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCKAP1Q9Y2A7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.08■□□□□ 0.33
NCKAP1Q9Y2A7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NCKAP1Q9Y2A7 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 HMGN1P19-201ENST00000436976 333 ntBASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 FAM86C2P-203ENST00000528684 1004 ntBASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 MIR4515-201ENST00000584082 81 ntBASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 AC105339.1-204ENST00000636249 355 ntBASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
NCKAP1Q9Y2A7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 TSEN15P1-201ENST00000423257 515 ntBASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 AC004449.1-201ENST00000564240 433 ntBASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 AC005412.3-201ENST00000580309 715 ntBASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 AL513210.1-201ENST00000629608 234 ntBASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 AL121761.2-201ENST00000598007 1648 ntBASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 AC092919.2-201ENST00000623631 1645 ntBASIC17.07■□□□□ 0.32
NCKAP1Q9Y2A7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 AL133373.2-201ENST00000623187 2828 ntBASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 AC140658.5-201ENST00000438532 169 ntBASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
NCKAP1Q9Y2A7 CROCCP1-201ENST00000426910 5675 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms