Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 AC093525.9-201ENST00000624961 1746 ntBASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS5Q9UPZ3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 AC245100.3-201ENST00000441281 285 ntBASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 PRYP5-201ENST00000451909 266 ntBASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 DUX4L27-201ENST00000554796 1261 ntBASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 RN7SL204P-201ENST00000582831 262 ntBASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 AC004877.2-201ENST00000623941 599 ntBASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 AC105339.1-204ENST00000636249 355 ntBASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 AC020916.1-201ENST00000587762 1774 ntBASIC20.29■□□□□ 0.84
HPS5Q9UPZ3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 AL020989.1-201ENST00000422979 469 ntBASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 MIR6752-201ENST00000618442 71 ntBASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS5Q9UPZ3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms