Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 AL353593.2-201ENST00000602529 1483 ntBASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 RCN1P2-201ENST00000398357 915 ntBASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 ABCD1P5-201ENST00000445663 754 ntBASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 KRT18P31-201ENST00000506277 1292 ntBASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 STK19B-204ENST00000512515 211 ntBASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 AL139327.4-201ENST00000612362 153 ntBASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00474Q9P2X8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms