Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.96■□□□□ 0.15
RLIMQ9NVW2 AC006449.5-201ENST00000610658 2098 ntBASIC15.96■□□□□ 0.15
RLIMQ9NVW2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RLIMQ9NVW2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RLIMQ9NVW2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
RLIMQ9NVW2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.96■□□□□ 0.14
RLIMQ9NVW2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 AL162727.3-201ENST00000635661 2787 ntBASIC15.95■□□□□ 0.14
RLIMQ9NVW2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 AC073592.5-201ENST00000624854 528 ntBASIC15.95■□□□□ 0.14
RLIMQ9NVW2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RLIMQ9NVW2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 KLF4P1-201ENST00000412782 1185 ntBASIC15.94■□□□□ 0.14
RLIMQ9NVW2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 AC104819.1-201ENST00000504587 486 ntBASIC15.94■□□□□ 0.14
RLIMQ9NVW2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 AC091076.1-201ENST00000610741 619 ntBASIC15.94■□□□□ 0.14
RLIMQ9NVW2 AC010331.1-201ENST00000611423 582 ntBASIC15.94■□□□□ 0.14
RLIMQ9NVW2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RLIMQ9NVW2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms