Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 AP001005.1-201ENST00000571755 1248 ntBASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 MIR1199-201ENST00000621445 119 ntBASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BLOC1S4Q9NUP1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 TOP3BP1-201ENST00000420768 1380 ntBASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 AC098831.1-202ENST00000438821 336 ntBASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 FDX1P1-201ENST00000449115 551 ntBASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 AC108073.2-201ENST00000464002 357 ntBASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 AL662844.1-201ENST00000546340 181 ntBASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 PGM5P2-202ENST00000637225 1043 ntBASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BLOC1S4Q9NUP1 AL603756.1-201ENST00000606511 2163 ntBASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 LINC00895-201ENST00000629028 1637 ntBASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 IGHV3-22-201ENST00000520721 359 ntBASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 GGTLC5P-201ENST00000617623 998 ntBASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 AC004790.2-201ENST00000623588 572 ntBASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 AC005593.1-201ENST00000624894 515 ntBASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.93■□□□□ 0.62
BLOC1S4Q9NUP1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 AL391256.1-201ENST00000443260 1855 ntBASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BLOC1S4Q9NUP1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms