Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 AL596087.1-201ENST00000400979 1969 ntBASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
LMBRD1Q9NUN5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 HLA-J-202ENST00000469281 1241 ntBASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 AL138831.2-201ENST00000606564 490 ntBASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 LINC00895-201ENST00000629028 1637 ntBASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMBRD1Q9NUN5 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 SLC25A3P1-201ENST00000443844 931 ntBASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 STK19B-204ENST00000512515 211 ntBASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 AC010491.1-201ENST00000563101 2797 ntBASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.6■□□□□ 0.73
LMBRD1Q9NUN5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.59■□□□□ 0.73
LMBRD1Q9NUN5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms