Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 AL645939.2-201ENST00000427340 991 ntBASIC20.45■□□□□ 0.86
SALL1Q9NSC2 AL671277.1-201ENST00000429656 993 ntBASIC20.45■□□□□ 0.86
SALL1Q9NSC2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 CYMP-203ENST00000474680 1263 ntBASIC20.45■□□□□ 0.86
SALL1Q9NSC2 HLA-J-203ENST00000494367 1087 ntBASIC20.45■□□□□ 0.86
SALL1Q9NSC2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 KRT8P48-201ENST00000515599 1220 ntBASIC20.45■□□□□ 0.86
SALL1Q9NSC2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 MIR3909-201ENST00000579518 119 ntBASIC20.45■□□□□ 0.86
SALL1Q9NSC2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.45■□□□□ 0.86
SALL1Q9NSC2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 AC023141.5-201ENST00000458585 616 ntBASIC20.44■□□□□ 0.86
SALL1Q9NSC2 RN7SL589P-201ENST00000481268 310 ntBASIC20.44■□□□□ 0.86
SALL1Q9NSC2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 AC093520.2-201ENST00000561830 333 ntBASIC20.44■□□□□ 0.86
SALL1Q9NSC2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 AKAP8P1-201ENST00000434743 1349 ntBASIC20.44■□□□□ 0.86
SALL1Q9NSC2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SALL1Q9NSC2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 AC020763.4-201ENST00000623414 4170 ntBASIC20.43■□□□□ 0.86
SALL1Q9NSC2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 RARRES2P8-201ENST00000566335 367 ntBASIC20.43■□□□□ 0.86
SALL1Q9NSC2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 AL161645.1-201ENST00000622716 1255 ntBASIC20.43■□□□□ 0.86
SALL1Q9NSC2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SALL1Q9NSC2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 AL627223.1-201ENST00000416693 442 ntBASIC20.42■□□□□ 0.86
SALL1Q9NSC2 AC092474.2-201ENST00000424288 719 ntBASIC20.42■□□□□ 0.86
SALL1Q9NSC2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 TIMM8BP1-201ENST00000452384 211 ntBASIC20.42■□□□□ 0.86
SALL1Q9NSC2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.42■□□□□ 0.86
SALL1Q9NSC2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 AC009093.7-201ENST00000623853 1223 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms