Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 AL135999.2-201ENST00000622438 1686 ntBASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.71■□□□□ 0.11
KRCC1Q9NPI7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRCC1Q9NPI7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRCC1Q9NPI7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRCC1Q9NPI7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
KRCC1Q9NPI7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
KRCC1Q9NPI7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.71■□□□□ 0.1
KRCC1Q9NPI7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
KRCC1Q9NPI7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 AC092068.3-201ENST00000587894 2016 ntBASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 SPDYE13P-201ENST00000445314 798 ntBASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 AC005336.2-201ENST00000593183 939 ntBASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRCC1Q9NPI7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 TNRC18P3-201ENST00000441896 2691 ntBASIC15.69■□□□□ 0.1
KRCC1Q9NPI7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms