Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 AC022211.2-201ENST00000585075 2527 ntBASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 KRT16P4-201ENST00000453883 522 ntBASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 MIR5100-201ENST00000579544 119 ntBASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 AL513477.1-201ENST00000602865 2407 ntBASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC68Q9H2F9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 EGFEM1P-202ENST00000431685 1563 ntBASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 AC060834.1-201ENST00000443027 2032 ntBASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC68Q9H2F9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC68Q9H2F9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms