Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HDHD3Q9BSH5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HDHD3Q9BSH5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HDHD3Q9BSH5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HDHD3Q9BSH5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.46□□□□□ -0.1
HDHD3Q9BSH5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 AC132938.5-201ENST00000624980 1813 ntBASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 AC011498.5-201ENST00000592027 486 ntBASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 AC026691.1-201ENST00000602502 2017 ntBASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 AC132872.4-202ENST00000622924 2756 ntBASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDHD3Q9BSH5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 GPR89P-201ENST00000407924 1495 ntBASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 AL391005.1-201ENST00000623953 2435 ntBASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 HLA-A-202ENST00000376806 1854 ntBASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 AL645728.1-201ENST00000366221 2101 ntBASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HDHD3Q9BSH5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 PCDHA1-201ENST00000378133 2726 ntBASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms