Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13□□□□□ -0.33
VGLL1Q99990 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
VGLL1Q99990 AC073508.3-201ENST00000619697 1419 ntBASIC13□□□□□ -0.33
VGLL1Q99990 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13□□□□□ -0.33
VGLL1Q99990 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13□□□□□ -0.33
VGLL1Q99990 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13□□□□□ -0.33
VGLL1Q99990 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VGLL1Q99990 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13□□□□□ -0.33
VGLL1Q99990 AC012306.2-201ENST00000609350 630 ntBASIC13□□□□□ -0.33
VGLL1Q99990 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13□□□□□ -0.33
VGLL1Q99990 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13□□□□□ -0.33
VGLL1Q99990 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13□□□□□ -0.33
VGLL1Q99990 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13□□□□□ -0.33
VGLL1Q99990 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13□□□□□ -0.33
VGLL1Q99990 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13□□□□□ -0.33
VGLL1Q99990 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13□□□□□ -0.33
VGLL1Q99990 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13□□□□□ -0.33
VGLL1Q99990 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13□□□□□ -0.33
VGLL1Q99990 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13□□□□□ -0.33
VGLL1Q99990 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.99□□□□□ -0.33
VGLL1Q99990 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.99□□□□□ -0.33
VGLL1Q99990 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VGLL1Q99990 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.99□□□□□ -0.33
VGLL1Q99990 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VGLL1Q99990 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 AC005521.1-201ENST00000393351 872 ntBASIC12.99□□□□□ -0.33
VGLL1Q99990 KRT18P57-201ENST00000443599 1254 ntBASIC12.99□□□□□ -0.33
VGLL1Q99990 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.99□□□□□ -0.33
VGLL1Q99990 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.99□□□□□ -0.33
VGLL1Q99990 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 GUSBP12-201ENST00000513727 720 ntBASIC12.99□□□□□ -0.33
VGLL1Q99990 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.99□□□□□ -0.33
VGLL1Q99990 AC124947.2-201ENST00000547118 1133 ntBASIC12.99□□□□□ -0.33
VGLL1Q99990 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.99□□□□□ -0.33
VGLL1Q99990 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.99□□□□□ -0.33
VGLL1Q99990 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
VGLL1Q99990 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
VGLL1Q99990 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VGLL1Q99990 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
VGLL1Q99990 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.99□□□□□ -0.33
VGLL1Q99990 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
VGLL1Q99990 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
VGLL1Q99990 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
VGLL1Q99990 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VGLL1Q99990 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
VGLL1Q99990 AL049757.1-201ENST00000616842 1596 ntBASIC12.98□□□□□ -0.33
VGLL1Q99990 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.98□□□□□ -0.33
VGLL1Q99990 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
VGLL1Q99990 AC125634.1-201ENST00000438758 1403 ntBASIC12.98□□□□□ -0.33
VGLL1Q99990 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.98□□□□□ -0.33
VGLL1Q99990 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.98□□□□□ -0.33
VGLL1Q99990 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.98□□□□□ -0.33
VGLL1Q99990 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.98□□□□□ -0.33
VGLL1Q99990 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms