Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PGBD4Q96DM1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 GNAS-203ENST00000306120 1878 ntBASIC18.46■□□□□ 0.55
PGBD4Q96DM1 AC092919.2-201ENST00000623631 1645 ntBASIC18.46■□□□□ 0.55
PGBD4Q96DM1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 AL513210.1-201ENST00000629608 234 ntBASIC18.46■□□□□ 0.55
PGBD4Q96DM1 AC105339.1-204ENST00000636249 355 ntBASIC18.46■□□□□ 0.55
PGBD4Q96DM1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PGBD4Q96DM1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
PGBD4Q96DM1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PGBD4Q96DM1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 AL121761.2-201ENST00000598007 1648 ntBASIC18.45■□□□□ 0.54
PGBD4Q96DM1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 AC140658.5-201ENST00000438532 169 ntBASIC18.45■□□□□ 0.54
PGBD4Q96DM1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PGBD4Q96DM1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 FAM86C2P-203ENST00000528684 1004 ntBASIC18.44■□□□□ 0.54
PGBD4Q96DM1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PGBD4Q96DM1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PGBD4Q96DM1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PGBD4Q96DM1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PGBD4Q96DM1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms