Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT9Q92600 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CNOT9Q92600 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT9Q92600 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.77■□□□□ 0.12
CNOT9Q92600 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT9Q92600 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CNOT9Q92600 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CNOT9Q92600 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT9Q92600 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.77■□□□□ 0.12
CNOT9Q92600 TSPY19P-201ENST00000418461 509 ntBASIC15.77■□□□□ 0.12
CNOT9Q92600 TSPY18P-201ENST00000441642 509 ntBASIC15.77■□□□□ 0.12
CNOT9Q92600 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CNOT9Q92600 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.77■□□□□ 0.12
CNOT9Q92600 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.77■□□□□ 0.12
CNOT9Q92600 PRELID1P1-202ENST00000567272 903 ntBASIC15.77■□□□□ 0.12
CNOT9Q92600 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT9Q92600 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT9Q92600 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.77■□□□□ 0.12
CNOT9Q92600 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CNOT9Q92600 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CNOT9Q92600 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.77■□□□□ 0.12
CNOT9Q92600 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.77■□□□□ 0.12
CNOT9Q92600 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.77■□□□□ 0.12
CNOT9Q92600 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT9Q92600 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.77■□□□□ 0.11
CNOT9Q92600 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT9Q92600 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.77■□□□□ 0.11
CNOT9Q92600 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.77■□□□□ 0.11
CNOT9Q92600 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT9Q92600 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CNOT9Q92600 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT9Q92600 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.77■□□□□ 0.11
CNOT9Q92600 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.77■□□□□ 0.11
CNOT9Q92600 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
CNOT9Q92600 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CNOT9Q92600 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT9Q92600 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CNOT9Q92600 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CNOT9Q92600 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT9Q92600 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.76■□□□□ 0.11
CNOT9Q92600 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CNOT9Q92600 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT9Q92600 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CNOT9Q92600 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CNOT9Q92600 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.76■□□□□ 0.11
CNOT9Q92600 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CNOT9Q92600 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CNOT9Q92600 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT9Q92600 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.76■□□□□ 0.11
CNOT9Q92600 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.76■□□□□ 0.11
CNOT9Q92600 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 AC091304.2-201ENST00000564639 760 ntBASIC15.76■□□□□ 0.11
CNOT9Q92600 NKAPP1-205ENST00000585790 367 ntBASIC15.76■□□□□ 0.11
CNOT9Q92600 MTDHP3-201ENST00000594186 672 ntBASIC15.76■□□□□ 0.11
CNOT9Q92600 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT9Q92600 AC012313.10-201ENST00000623509 926 ntBASIC15.76■□□□□ 0.11
CNOT9Q92600 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CNOT9Q92600 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.76■□□□□ 0.11
CNOT9Q92600 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CNOT9Q92600 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT9Q92600 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
CNOT9Q92600 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT9Q92600 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.75■□□□□ 0.11
CNOT9Q92600 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.75■□□□□ 0.11
CNOT9Q92600 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.75■□□□□ 0.11
CNOT9Q92600 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT9Q92600 RBM17P3-201ENST00000417687 1192 ntBASIC15.75■□□□□ 0.11
CNOT9Q92600 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.75■□□□□ 0.11
CNOT9Q92600 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms