Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 AL645728.1-201ENST00000366221 2101 ntBASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 AL022342.1-201ENST00000400363 863 ntBASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH19Q8TAB3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 TUBB8P12-201ENST00000308911 1335 ntBASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 TUBB7P-202ENST00000428444 1305 ntBASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 TUBB8P7-204ENST00000567960 1332 ntBASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 AC092171.3-201ENST00000610122 2651 ntBASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH19Q8TAB3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 PCDHA14-201ENST00000506751 2298 ntBASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms