Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 BX005266.1-201ENST00000473402 457 ntBASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 REXO1L6P-202ENST00000619970 1078 ntBASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 NCF1C-201ENST00000438382 1427 ntBASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 AC022211.2-201ENST00000585075 2527 ntBASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 FRMD8P1-201ENST00000440433 1524 ntBASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TTC9CQ8N5M4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TTC9CQ8N5M4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 SCARNA2-201ENST00000458748 420 ntBASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 KRT18P56-201ENST00000507275 550 ntBASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 AC008608.2-201ENST00000606089 416 ntBASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TTC9CQ8N5M4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms