Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 CD81-207ENST00000481687 890 ntTSL 2 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 KRT18P34-201ENST00000488218 1270 ntBASIC21.16■□□□□ 0.98
COL23A1Q86Y22 AC093004.1-201ENST00000508850 424 ntBASIC21.16■□□□□ 0.98
COL23A1Q86Y22 MPDU1-223ENST00000582151 728 ntBASIC21.16■□□□□ 0.98
COL23A1Q86Y22 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL23A1Q86Y22 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 OSM-203ENST00000403463 464 ntTSL 3 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 TTTY23B-201ENST00000442790 549 ntBASIC21.15■□□□□ 0.98
COL23A1Q86Y22 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 AL079307.3-201ENST00000556114 283 ntBASIC21.15■□□□□ 0.98
COL23A1Q86Y22 AC105021.1-202ENST00000570572 669 ntBASIC21.15■□□□□ 0.98
COL23A1Q86Y22 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.15■□□□□ 0.98
COL23A1Q86Y22 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.14■□□□□ 0.98
COL23A1Q86Y22 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
COL23A1Q86Y22 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL23A1Q86Y22 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 TMEM14DP-201ENST00000422205 345 ntBASIC21.14■□□□□ 0.97
COL23A1Q86Y22 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 AC021097.1-201ENST00000607902 574 ntBASIC21.14■□□□□ 0.97
COL23A1Q86Y22 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL23A1Q86Y22 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 SLC7A15P-201ENST00000424028 1363 ntBASIC21.13■□□□□ 0.97
COL23A1Q86Y22 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.13■□□□□ 0.97
COL23A1Q86Y22 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 FAM220BP-201ENST00000377689 816 ntBASIC21.13■□□□□ 0.97
COL23A1Q86Y22 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 PRYP6-201ENST00000514804 343 ntBASIC21.13■□□□□ 0.97
COL23A1Q86Y22 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 SNX29P1-201ENST00000548357 1007 ntBASIC21.13■□□□□ 0.97
COL23A1Q86Y22 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 MIR6775-201ENST00000617557 69 ntBASIC21.13■□□□□ 0.97
COL23A1Q86Y22 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL23A1Q86Y22 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms