Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 HNRNPDP1-201ENST00000439535 754 ntBASIC15.12■□□□□ 0.01
RTTNQ86VV8 AC018712.1-201ENST00000455767 687 ntBASIC15.12■□□□□ 0.01
RTTNQ86VV8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 AC145285.3-201ENST00000564603 959 ntBASIC15.12■□□□□ 0.01
RTTNQ86VV8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 AL355877.3-201ENST00000622820 899 ntBASIC15.12■□□□□ 0.01
RTTNQ86VV8 AD001527.2-201ENST00000622994 785 ntBASIC15.12■□□□□ 0.01
RTTNQ86VV8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 AC092068.3-201ENST00000587894 2016 ntBASIC15.12■□□□□ 0.01
RTTNQ86VV8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 RPSAP43-201ENST00000402237 625 ntBASIC15.12■□□□□ 0.01
RTTNQ86VV8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 DNAJB3-202ENST00000449667 1266 ntBASIC15.12■□□□□ 0.01
RTTNQ86VV8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RTTNQ86VV8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RTTNQ86VV8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 RNF216P1-203ENST00000404404 2427 ntBASIC15.11■□□□□ 0.01
RTTNQ86VV8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 AC009533.2-201ENST00000543664 586 ntBASIC15.11■□□□□ 0.01
RTTNQ86VV8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 AC009336.1-201ENST00000608941 1553 ntBASIC15.11■□□□□ 0.01
RTTNQ86VV8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 PKD1P5-201ENST00000532415 10291 ntBASIC15.11■□□□□ 0.01
RTTNQ86VV8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RTTNQ86VV8 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.11■□□□□ 0.01
RTTNQ86VV8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RTTNQ86VV8 AF186996.4-201ENST00000467186 377 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms