Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 FAM185BP-201ENST00000443595 716 ntBASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 AC107918.2-201ENST00000530817 355 ntBASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 RHOQP3-201ENST00000437982 621 ntBASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 AC002347.1-201ENST00000569543 541 ntBASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 REXO1L3P-201ENST00000622202 1288 ntBASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 AC007064.4-201ENST00000637740 555 ntBASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 AL021920.2-201ENST00000624828 1351 ntBASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRTM4Q86VH4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 AL645608.8-201ENST00000606034 2086 ntBASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms