Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 AP000347.1-202ENST00000435868 847 ntBASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 FOSL1P1-201ENST00000511041 816 ntBASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 MIR3917-201ENST00000580971 93 ntBASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXR1Q6PIV2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 KRT18P41-201ENST00000518924 1277 ntBASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 AC091304.2-201ENST00000564639 760 ntBASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXR1Q6PIV2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXR1Q6PIV2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms