Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 Z85996.1-201ENST00000494644 937 ntBASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP4Q6PIL6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KCNIP4Q6PIL6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 DDX43P3-201ENST00000441064 443 ntBASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
KCNIP4Q6PIL6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms