Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 KRT18P27-201ENST00000427733 1299 ntBASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 SLC25A6P4-201ENST00000586535 553 ntBASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 AL356488.2-201ENST00000602755 427 ntBASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 AC141586.5-201ENST00000624546 2050 ntBASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 AL590787.1-201ENST00000568856 1315 ntBASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 LINC02012-201ENST00000608206 1725 ntBASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCDC144NLQ6NUI1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 ELK2BP-201ENST00000415014 1224 ntBASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 AC026396.1-201ENST00000419388 421 ntBASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 AC124947.2-201ENST00000547118 1133 ntBASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCDC144NLQ6NUI1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCDC144NLQ6NUI1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms