Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 KRT8P9-201ENST00000558927 1449 ntBASIC15.34■□□□□ 0.05
CCDC58Q4VC31 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC58Q4VC31 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.33■□□□□ 0.05
CCDC58Q4VC31 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 MMP23A-201ENST00000234610 1017 ntBASIC15.33■□□□□ 0.04
CCDC58Q4VC31 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 AC068472.1-201ENST00000474589 881 ntBASIC15.33■□□□□ 0.04
CCDC58Q4VC31 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.33■□□□□ 0.04
CCDC58Q4VC31 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 AC078925.2-201ENST00000624013 1973 ntBASIC15.33■□□□□ 0.04
CCDC58Q4VC31 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC58Q4VC31 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 IGHGP-201ENST00000390555 1178 ntBASIC15.32■□□□□ 0.04
CCDC58Q4VC31 FAM8A6P-201ENST00000407496 1135 ntBASIC15.32■□□□□ 0.04
CCDC58Q4VC31 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 IGHV3-52-201ENST00000519770 353 ntBASIC15.32■□□□□ 0.04
CCDC58Q4VC31 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCDC58Q4VC31 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms