Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSRP1Q08945 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSRP1Q08945 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.81■□□□□ 0.76
SSRP1Q08945 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSRP1Q08945 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSRP1Q08945 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSRP1Q08945 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.81■□□□□ 0.76
SSRP1Q08945 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.81■□□□□ 0.76
SSRP1Q08945 KRT18P27-201ENST00000427733 1299 ntBASIC19.81■□□□□ 0.76
SSRP1Q08945 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.81■□□□□ 0.76
SSRP1Q08945 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.81■□□□□ 0.76
SSRP1Q08945 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.81■□□□□ 0.76
SSRP1Q08945 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.81■□□□□ 0.76
SSRP1Q08945 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.81■□□□□ 0.76
SSRP1Q08945 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SSRP1Q08945 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSRP1Q08945 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.81■□□□□ 0.76
SSRP1Q08945 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.81■□□□□ 0.76
SSRP1Q08945 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSRP1Q08945 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.81■□□□□ 0.76
SSRP1Q08945 NKILA-202ENST00000614771 2598 ntBASIC19.81■□□□□ 0.76
SSRP1Q08945 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.8■□□□□ 0.76
SSRP1Q08945 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.8■□□□□ 0.76
SSRP1Q08945 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SSRP1Q08945 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SSRP1Q08945 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.8■□□□□ 0.76
SSRP1Q08945 AP002469.2-201ENST00000531724 424 ntBASIC19.8■□□□□ 0.76
SSRP1Q08945 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.8■□□□□ 0.76
SSRP1Q08945 AL160237.2-201ENST00000556165 472 ntBASIC19.8■□□□□ 0.76
SSRP1Q08945 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.8■□□□□ 0.76
SSRP1Q08945 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.8■□□□□ 0.76
SSRP1Q08945 DUX4L17-201ENST00000557360 1267 ntBASIC19.8■□□□□ 0.76
SSRP1Q08945 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.8■□□□□ 0.76
SSRP1Q08945 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 AC008735.5-201ENST00000623544 497 ntBASIC19.8■□□□□ 0.76
SSRP1Q08945 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
SSRP1Q08945 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SSRP1Q08945 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSRP1Q08945 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SSRP1Q08945 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SSRP1Q08945 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.79■□□□□ 0.76
SSRP1Q08945 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
SSRP1Q08945 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.79■□□□□ 0.76
SSRP1Q08945 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.79■□□□□ 0.76
SSRP1Q08945 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 RPS2P28-201ENST00000314255 741 ntBASIC19.79■□□□□ 0.76
SSRP1Q08945 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.79■□□□□ 0.76
SSRP1Q08945 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.79■□□□□ 0.76
SSRP1Q08945 AC073621.1-201ENST00000392730 636 ntBASIC19.79■□□□□ 0.76
SSRP1Q08945 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SSRP1Q08945 TPM4P1-201ENST00000436100 807 ntBASIC19.79■□□□□ 0.76
SSRP1Q08945 PAWRP1-201ENST00000451083 565 ntBASIC19.79■□□□□ 0.76
SSRP1Q08945 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.79■□□□□ 0.76
SSRP1Q08945 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.79■□□□□ 0.76
SSRP1Q08945 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.79■□□□□ 0.76
SSRP1Q08945 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.79■□□□□ 0.76
SSRP1Q08945 AL805961.1-202ENST00000641562 540 ntBASIC19.79■□□□□ 0.76
SSRP1Q08945 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SSRP1Q08945 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SSRP1Q08945 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.79■□□□□ 0.76
SSRP1Q08945 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.79■□□□□ 0.76
SSRP1Q08945 PI4KAP1-204ENST00000612579 1703 ntBASIC19.79■□□□□ 0.76
SSRP1Q08945 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSRP1Q08945 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.79■□□□□ 0.76
SSRP1Q08945 TUBB8P12-201ENST00000308911 1335 ntBASIC19.78■□□□□ 0.76
SSRP1Q08945 TUBB7P-202ENST00000428444 1305 ntBASIC19.78■□□□□ 0.76
SSRP1Q08945 TUBB8P7-204ENST00000567960 1332 ntBASIC19.78■□□□□ 0.76
SSRP1Q08945 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSRP1Q08945 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SSRP1Q08945 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSRP1Q08945 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSRP1Q08945 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSRP1Q08945 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
SSRP1Q08945 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.78■□□□□ 0.76
SSRP1Q08945 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSRP1Q08945 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSRP1Q08945 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms