Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.47□□□□□ -0.09
SSBP1Q04837 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 AL391807.1-203ENST00000604392 2365 ntBASIC14.47□□□□□ -0.09
SSBP1Q04837 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP1Q04837 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.47□□□□□ -0.09
SSBP1Q04837 AC022532.1-201ENST00000624563 1728 ntBASIC14.47□□□□□ -0.09
SSBP1Q04837 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP1Q04837 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SSBP1Q04837 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SSBP1Q04837 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 HLA-L-209ENST00000420110 1011 ntBASIC14.47□□□□□ -0.09
SSBP1Q04837 AC103564.2-201ENST00000432853 1299 ntBASIC14.47□□□□□ -0.09
SSBP1Q04837 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.47□□□□□ -0.09
SSBP1Q04837 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.47□□□□□ -0.09
SSBP1Q04837 AC122714.2-201ENST00000502787 707 ntBASIC14.47□□□□□ -0.09
SSBP1Q04837 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.47□□□□□ -0.09
SSBP1Q04837 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP1Q04837 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP1Q04837 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP1Q04837 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
SSBP1Q04837 AL136038.4-201ENST00000603606 1261 ntBASIC14.47□□□□□ -0.09
SSBP1Q04837 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.47□□□□□ -0.09
SSBP1Q04837 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
SSBP1Q04837 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP1Q04837 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.47□□□□□ -0.09
SSBP1Q04837 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SSBP1Q04837 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP1Q04837 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.47□□□□□ -0.09
SSBP1Q04837 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SSBP1Q04837 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSBP1Q04837 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SSBP1Q04837 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.46□□□□□ -0.09
SSBP1Q04837 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SSBP1Q04837 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.46□□□□□ -0.09
SSBP1Q04837 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.46□□□□□ -0.09
SSBP1Q04837 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
SSBP1Q04837 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SSBP1Q04837 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SSBP1Q04837 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.46□□□□□ -0.09
SSBP1Q04837 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.46□□□□□ -0.09
SSBP1Q04837 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SSBP1Q04837 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.46□□□□□ -0.09
SSBP1Q04837 AP003733.1-201ENST00000491725 852 ntBASIC14.46□□□□□ -0.09
SSBP1Q04837 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.46□□□□□ -0.09
SSBP1Q04837 STK25P1-201ENST00000585406 838 ntBASIC14.46□□□□□ -0.09
SSBP1Q04837 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.46□□□□□ -0.09
SSBP1Q04837 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.46□□□□□ -0.09
SSBP1Q04837 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 AL139011.1-202ENST00000642063 584 ntBASIC14.46□□□□□ -0.09
SSBP1Q04837 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.46□□□□□ -0.09
SSBP1Q04837 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SSBP1Q04837 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SSBP1Q04837 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.46□□□□□ -0.1
SSBP1Q04837 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
SSBP1Q04837 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SSBP1Q04837 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SSBP1Q04837 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SSBP1Q04837 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms