Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDR2Q01850 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDR2Q01850 FGFR3P6-201ENST00000457012 610 ntBASIC18.22■□□□□ 0.51
CDR2Q01850 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.22■□□□□ 0.51
CDR2Q01850 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDR2Q01850 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.22■□□□□ 0.51
CDR2Q01850 REXO1L6P-202ENST00000619970 1078 ntBASIC18.22■□□□□ 0.51
CDR2Q01850 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDR2Q01850 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDR2Q01850 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.22■□□□□ 0.51
CDR2Q01850 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CDR2Q01850 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.22■□□□□ 0.51
CDR2Q01850 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDR2Q01850 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDR2Q01850 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDR2Q01850 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDR2Q01850 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.22■□□□□ 0.51
CDR2Q01850 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDR2Q01850 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDR2Q01850 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.22■□□□□ 0.51
CDR2Q01850 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDR2Q01850 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.22■□□□□ 0.51
CDR2Q01850 PCDHB17P-201ENST00000539533 2393 ntBASIC18.22■□□□□ 0.51
CDR2Q01850 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.21■□□□□ 0.51
CDR2Q01850 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.21■□□□□ 0.51
CDR2Q01850 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDR2Q01850 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.21■□□□□ 0.51
CDR2Q01850 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDR2Q01850 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.21■□□□□ 0.51
CDR2Q01850 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
CDR2Q01850 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDR2Q01850 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.21■□□□□ 0.51
CDR2Q01850 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.21■□□□□ 0.51
CDR2Q01850 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.21■□□□□ 0.51
CDR2Q01850 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CDR2Q01850 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.21■□□□□ 0.51
CDR2Q01850 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.21■□□□□ 0.51
CDR2Q01850 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.21■□□□□ 0.51
CDR2Q01850 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.21■□□□□ 0.51
CDR2Q01850 AC008608.2-201ENST00000606089 416 ntBASIC18.21■□□□□ 0.51
CDR2Q01850 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CDR2Q01850 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
CDR2Q01850 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CDR2Q01850 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.21■□□□□ 0.51
CDR2Q01850 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CDR2Q01850 TUBB8P12-201ENST00000308911 1335 ntBASIC18.21■□□□□ 0.51
CDR2Q01850 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 TUBB7P-202ENST00000428444 1305 ntBASIC18.21■□□□□ 0.51
CDR2Q01850 TUBB8P7-204ENST00000567960 1332 ntBASIC18.21■□□□□ 0.51
CDR2Q01850 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CDR2Q01850 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDR2Q01850 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
CDR2Q01850 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.21■□□□□ 0.5
CDR2Q01850 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.2■□□□□ 0.5
CDR2Q01850 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDR2Q01850 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CDR2Q01850 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDR2Q01850 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDR2Q01850 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.2■□□□□ 0.5
CDR2Q01850 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.2■□□□□ 0.5
CDR2Q01850 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDR2Q01850 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDR2Q01850 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDR2Q01850 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.2■□□□□ 0.5
CDR2Q01850 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDR2Q01850 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDR2Q01850 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.2■□□□□ 0.5
CDR2Q01850 SART3-203ENST00000546611 1184 ntBASIC18.2■□□□□ 0.5
CDR2Q01850 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.2■□□□□ 0.5
CDR2Q01850 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.2■□□□□ 0.5
CDR2Q01850 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDR2Q01850 AL589182.2-201ENST00000619332 1049 ntBASIC18.2■□□□□ 0.5
CDR2Q01850 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.2■□□□□ 0.5
CDR2Q01850 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.2■□□□□ 0.5
CDR2Q01850 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDR2Q01850 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDR2Q01850 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDR2Q01850 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms