Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.26■□□□□ 0.19
NR1H2P55055 DUTP2-201ENST00000519164 463 ntBASIC16.26■□□□□ 0.19
NR1H2P55055 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.26■□□□□ 0.19
NR1H2P55055 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.26■□□□□ 0.19
NR1H2P55055 KRT126P-201ENST00000549467 1181 ntBASIC16.26■□□□□ 0.19
NR1H2P55055 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
NR1H2P55055 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.26■□□□□ 0.19
NR1H2P55055 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.26■□□□□ 0.19
NR1H2P55055 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.26■□□□□ 0.19
NR1H2P55055 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.26■□□□□ 0.19
NR1H2P55055 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.26■□□□□ 0.19
NR1H2P55055 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NR1H2P55055 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
NR1H2P55055 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 AC036111.1-201ENST00000533973 1582 ntBASIC16.26■□□□□ 0.19
NR1H2P55055 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NR1H2P55055 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
NR1H2P55055 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.25■□□□□ 0.19
NR1H2P55055 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 AL109659.2-201ENST00000606809 1674 ntBASIC16.25■□□□□ 0.19
NR1H2P55055 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
NR1H2P55055 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NR1H2P55055 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
NR1H2P55055 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 KRT18P48-201ENST00000434763 852 ntBASIC16.25■□□□□ 0.19
NR1H2P55055 TPM4P1-201ENST00000436100 807 ntBASIC16.25■□□□□ 0.19
NR1H2P55055 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.25■□□□□ 0.19
NR1H2P55055 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.25■□□□□ 0.19
NR1H2P55055 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.25■□□□□ 0.19
NR1H2P55055 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
NR1H2P55055 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.25■□□□□ 0.19
NR1H2P55055 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.25■□□□□ 0.19
NR1H2P55055 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.25■□□□□ 0.19
NR1H2P55055 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.25■□□□□ 0.19
NR1H2P55055 HYMAI.1-201ENST00000620949 238 ntBASIC16.25■□□□□ 0.19
NR1H2P55055 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.25■□□□□ 0.19
NR1H2P55055 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NR1H2P55055 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.25■□□□□ 0.19
NR1H2P55055 AC078925.2-201ENST00000624013 1973 ntBASIC16.25■□□□□ 0.19
NR1H2P55055 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NR1H2P55055 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NR1H2P55055 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 KRT8P50-201ENST00000562022 1438 ntBASIC16.25■□□□□ 0.19
NR1H2P55055 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NR1H2P55055 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NR1H2P55055 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NR1H2P55055 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.25■□□□□ 0.19
NR1H2P55055 RNF216P1-203ENST00000404404 2427 ntBASIC16.25■□□□□ 0.19
NR1H2P55055 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H2P55055 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.24■□□□□ 0.19
NR1H2P55055 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NR1H2P55055 DBET-201ENST00000630918 3363 ntBASIC16.24■□□□□ 0.19
NR1H2P55055 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NR1H2P55055 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NR1H2P55055 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NR1H2P55055 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NR1H2P55055 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NR1H2P55055 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.24■□□□□ 0.19
NR1H2P55055 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.24■□□□□ 0.19
NR1H2P55055 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H2P55055 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.24■□□□□ 0.19
NR1H2P55055 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NR1H2P55055 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.24■□□□□ 0.19
NR1H2P55055 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
NR1H2P55055 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.24■□□□□ 0.19
NR1H2P55055 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms