Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC25A1P53007 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC25A1P53007 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SLC25A1P53007 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC25A1P53007 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC25A1P53007 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC25A1P53007 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC25A1P53007 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SLC25A1P53007 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC25A1P53007 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC25A1P53007 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC25A1P53007 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC25A1P53007 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.18■□□□□ 0.02
SLC25A1P53007 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC25A1P53007 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.18■□□□□ 0.02
SLC25A1P53007 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC25A1P53007 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC25A1P53007 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC25A1P53007 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 AC079776.2-201ENST00000641154 1609 ntBASIC15.17■□□□□ 0.02
SLC25A1P53007 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC25A1P53007 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SLC25A1P53007 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SLC25A1P53007 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC25A1P53007 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.17■□□□□ 0.02
SLC25A1P53007 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC25A1P53007 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC25A1P53007 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.17■□□□□ 0.02
SLC25A1P53007 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC25A1P53007 AC104819.1-201ENST00000504587 486 ntBASIC15.17■□□□□ 0.02
SLC25A1P53007 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC25A1P53007 MIR3180-1-201ENST00000580374 94 ntBASIC15.17■□□□□ 0.02
SLC25A1P53007 MIR3180-3-201ENST00000584616 94 ntBASIC15.17■□□□□ 0.02
SLC25A1P53007 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC25A1P53007 AC010331.1-201ENST00000611423 582 ntBASIC15.17■□□□□ 0.02
SLC25A1P53007 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.17■□□□□ 0.02
SLC25A1P53007 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC25A1P53007 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
SLC25A1P53007 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SLC25A1P53007 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC25A1P53007 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC25A1P53007 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC25A1P53007 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC25A1P53007 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC25A1P53007 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC25A1P53007 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC25A1P53007 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC25A1P53007 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC25A1P53007 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SLC25A1P53007 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC25A1P53007 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SLC25A1P53007 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SLC25A1P53007 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC25A1P53007 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC25A1P53007 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC25A1P53007 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC25A1P53007 AC012615.1-201ENST00000565797 1299 ntBASIC15.16■□□□□ 0.02
SLC25A1P53007 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC25A1P53007 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SLC25A1P53007 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC25A1P53007 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC25A1P53007 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC25A1P53007 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC25A1P53007 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC25A1P53007 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC25A1P53007 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms